biosniff 1.0.0
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Description:
biosniff 1.0.0
Python version:
3.7, 3.8, 3.9, 3.10
Issues:
On github
This tools is a simple Sniffer for Biological formats (and compression formats)
Installation
pip install biosniff
Usage
biosniff file.fasta
biosniff example.vcf
...
There are about 50 formats supported for now including:
abi, bam, bai, bcf, binary_bed, bed, bedgraph, bigwig, bigbed, bplink,
bz2, cram, clustal, dsrc, embl,ena, fasta, fastq, genbank, gfa, gff2,
gff3, gz, json, maf, newick, nexus, ods, paf, phylip, phyloxml, plink,
qual, sam, scf, stockholm, rar, twobit, tsv, vcf, wiggle, wig,
xls, xlsx, xmfa, yaml, zip, 7zip, xz
Changelog
Version
Description
1.0.0
add logo, add Python 3.10 in CI and tag to version 1.0
0.4.0
additional test and fix missing click requirements
0.3.0
add missing MANIFEST and applied black
0.2.0
more tests (80% coverage) and some simplifications
0.1.0
first commit
License:
For personal and professional use. You cannot resell or redistribute these repositories in their original state.
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