Description:
brainobservatoryutilities 0.4.0
brain_observatory_utilities
Tools for analysis, manipulation and visualization of Brain Observatory data availible via the AllenSDK.
Functions in this repository depend on the AllenSDK
https://github.com/AllenInstitute/AllenSDK
Installation
Set up a dedicated conda environment:
conda create -n brain_observatory_utilities python=3.8
Activate the new environment:
conda activate brain_observatory_utilities
Make the new environment visible in the Jupyter
pip install ipykernel
python -m ipykernel install --user --name brain_observatory_utilities
Install brain_observatory_utilities
if you intend to edit the source code, install in developer mode:
git clone https://github.com/AllenInstitute/brain_observatory_utilities.git
cd brain_observatory_utilities
pip install -e .
Level of Support
We are planning on occasional updating these tools and repo structure with no fixed schedule. Community involvement is encouraged through both issues and pull requests.
License
For personal and professional use. You cannot resell or redistribute these repositories in their original state.
Customer Reviews
There are no reviews.
