Description:
madic 0.1.0
Overview
madic is a Python package for detecting and correcting interference in targeted
mass spectrometry data using high-performance Pandas data structures.
Purpose
Multiple reaction monitoring (MRM, also known as selected reaction monitoring /
SRM) data acquired during targeted mass spectrometry experiments can suffer
from complex interference patterns that hinder accurate quantification. This
software identifies and corrects interference, as well increases the confidence
of peptide calls according to three qualities of an ideal chromatogram:
relative transition ratios similar to synthetic standards, co-elution of all
individual target transitions with respective stable isotope labeled (SIL)
transitions, and a distinguished peak relative to the background. Additionally,
these criteria should be satisfied for all replicate injections of a given
sample.
More information
Follow the github URL below for more information.
License
For personal and professional use. You cannot resell or redistribute these repositories in their original state.
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