Description:

omerobifrost 0.0.5

OMERO-Bifrost

Bifrost bridge for large-scale transfer of bioimage data using an OMERO server. A simplified Python CLI tool and package to transfer image data/metadata from and to an OMERO server.


Requirements

Python 3.8
typer 0.9.0
rich 13.5.2
zeroc-ice 3.6.5
omero-py 5.13.1 (downgraded from 5.15.0 given ezomero 2.1.0 requirements)
omero-upload 0.4.0
ezomero 2.1.0

Install with PyPI
pip install omero-bifrost
Usage
Type omero-bifrost --help to see the full range of commands and subcommands.

Development notes
To install packages in requirements.txt in the current conda env.:
pip install -r requirements.txt
To test package, install using pip:
pip install -e .

License

For personal and professional use. You cannot resell or redistribute these repositories in their original state.

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