bio2bel-entrez 0.2.2
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Description:
bio2belentrez 0.2.2
This package downloads, parses, and stores the Entrez Gene and HomoloGene databases then provides utilities for
converting to BEL.
Installation
bio2bel_entrez can be installed easily from PyPI with
the following code in your favorite terminal:
$ python3 -m pip install bio2bel_entrez
or from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/entrez.git@master
Setup
Entrez can be downloaded and populated from either the Python REPL or the automatically installed command line
utility.
Python REPL
>>> import bio2bel_entrez
>>> entrez_manager = bio2bel_entrez.Manager()
>>> entrez_manager.populate()
Command Line Utility
bio2bel_entrez populate
Citations
Maglott, D., et al. (2011). Entrez Gene: gene-centered information at NCBI. Nucleic Acids Research, 39(Database issue), D52–D57.
License:
For personal and professional use. You cannot resell or redistribute these repositories in their original state.
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