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Description:
tiledbsc 0.1.11
Overview
This is a POC Python implementation of the proposed Unified Single-cell Data Model.
Installation
Using pip
This code is hosted at PyPI, so you can do
python -m pip install tiledbsc
To install a specific version:
python -m pip install git+https://github.com/single-cell-data/[email protected]#subdirectory=apis/python
To update to the latest version:
python -m pip install --upgrade tiledbsc
From source
This requires tiledb (see ./setup.cfg for version), in addition to other dependencies in setup.cfg.
Clone this repo
cd into your checkout and then cd apis/python
python -m pip install .
Or, if you wish to modify the code and run it, python setup.py develop
Optionally, if you prefer, you can run that inside venv:
python -m venv venv
. ./venv/bin/activate
python -m pip install .
In either case:
python -m pytest tests
Status
Please see https://github.com/single-cell-data/TileDB-SingleCell/issues.
License
For personal and professional use. You cannot resell or redistribute these repositories in their original state.
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